STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105929311Phospholipase A(2). (149 aa)    
Predicted Functional Partners:
PLA2G12B
Phospholipase A2 group XIIB.
     
 0.978
pla2g4a
Phospholipase A2.
     
 0.963
pla2g12a
Phospholipase A2, group XIIA.
     
 0.960
LOC105922122
Phospholipase A(2).
  
  
0.957
LOC105917421
Cytochrome P450, family 4, subfamily F, polypeptide 3.
     
 0.956
enpp6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
     
 0.953
pemt
Phosphatidylethanolamine N-methyltransferase; Catalyzes the three sequential steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylethanolamine (PE) to phosphatidylmonomethylethanolamine (PMME), PMME to phosphatidyldimethylethanolamine (PDME), and PDME to phosphatidylcholine (PC); Belongs to the class VI-like SAM-binding methyltransferase superfamily. PEMT/PEM2 methyltransferase family.
     
 0.953
LOC105937616
Si:dkey-177p2.18.
     
 0.950
lpcat2
Lysophosphatidylcholine acyltransferase 2.
     
 0.941
LOC105935236
Transmembrane protein 189.
     
 0.941
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.