STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105930625Neurexin 3b. (1652 aa)    
Predicted Functional Partners:
nlgn1
Neuroligin 1.
    
 0.905
nlgn2
COesterase domain-containing protein.
    
 0.881
LOC105920129
Neuroligin 4 X-linked a.
    
 0.881
LOC105929411
Neuroligin 3b.
    
 0.860
nlgn3
Neuroligin 3a.
    
 0.860
LOC105931840
COesterase domain-containing protein.
    
 0.847
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.779
LOC105921523
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.779
lrrtm2
Leucine rich repeat transmembrane neuronal 2.
    
 0.690
LOC105933782
Neurexin 1.
  
  
 
0.679
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.