STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wsb2WD repeat and SOCS box containing 2. (415 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.965
rbbp5
Retinoblastoma binding protein 5.
   
 0.962
LOC105926445
KAT8 regulatory NSL complex subunit 1a.
    
 0.929
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.922
setd1a
SET domain containing 1A, histone lysine methyltransferase.
    
 0.866
setd1b
SET domain containing 1B, histone lysine methyltransferase a.
    
 0.866
kat14
Lysine acetyltransferase 14.
    
 0.850
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.841
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.838
HCFC1
Host cell factor C1 (VP16-accessory protein).
   
 0.836
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.