STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105932177Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.766
nxf1
Zgc:153681.
    
 0.698
LOC105935141
Protein S100; Belongs to the S-100 family.
    
 0.695
maml1
Mastermind-like transcriptional coactivator 1.
    
 0.606
NCSTN
Nicastrin.
    
 0.581
LOC105935373
MSL complex subunit 2.
    
 0.574
MSL2
MSL complex subunit 2.
    
 0.574
psenen
Presenilin enhancer, gamma-secretase subunit.
    
 0.547
ENSFHEP00000005625
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.539
LOC105939576
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.539
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (30%) [HD]