STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YAF2YY1 associated factor 2. (182 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
    
 0.944
rnf2
Ring finger protein 2.
    
 0.940
pcgf6
Polycomb group ring finger 6.
    
 0.913
LOC105930861
L3MBTL histone methyl-lysine binding protein 2.
    
 0.909
PCGF2
Polycomb group RING finger protein 2.
    
 0.887
pcgf1
Polycomb group ring finger 1.
    
 0.864
pcgf5
Polycomb group ring finger 5a.
    
 0.858
PCGF3
Polycomb group RING finger protein 3.
    
 0.855
LOC105934418
THAP-type domain-containing protein.
   
 0.853
mbtd1
MBT domain-containing protein 1.
    
 0.816
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.