STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc177Uncharacterized protein. (708 aa)    
Predicted Functional Partners:
prr12
Proline rich 12a.
      
 0.621
ENSFHEP00000032601
Proline rich 12b.
      
 0.621
foxn4
Forkhead box N4.
    
 
 0.539
cyfip2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 
 0.414
ENSFHEP00000013219
BHLH domain-containing protein.
      
 0.410
tpgs1
Uncharacterized protein.
      
 0.407
ewsr1
EWS RNA-binding protein 1b.
      
 0.407
ENSFHEP00000014477
Uncharacterized protein.
    
  0.401
LOC105915855
Uncharacterized protein.
    
  0.401
tnr
Tenascin R (restrictin, janusin).
    
  0.401
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.