STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ank2Uncharacterized protein. (4373 aa)    
Predicted Functional Partners:
LOC105930552
Ring finger protein 146.
    
 0.726
RNF146
Ring finger protein 146.
    
 0.726
ENSFHEP00000011861
RGS domain-containing protein.
    
 0.623
AXIN2
Axin 2.
    
 0.623
axin1
Axin 1.
    
 0.623
LOC105920126
Uncharacterized protein.
    
 0.623
gak
Cyclin G associated kinase.
  
 0.615
rps27a
Ribosomal protein S27a.
    
  0.598
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
  0.589
uso1
USO1 vesicle transport factor.
    
  0.580
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.