STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pank2Pantothenate kinase 2. (433 aa)    
Predicted Functional Partners:
coasy
CoA synthase.
    
 0.982
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.976
LOC105937205
Pantothenate kinase 1.
  
  
 
0.953
ppcdc
Phosphopantothenoylcysteine decarboxylase.
     
 0.860
mlx
MAX dimerization protein MLX.
     
 0.831
nlrx1
NLR family member X1.
    
  0.773
pank4
Pantothenate kinase.
     
0.753
dhx33
DEAH (Asp-Glu-Ala-His) box polypeptide 33.
     
 0.729
dcakd
Dephospho-CoA kinase domain containing.
    
 0.729
LOC105930842
Cytochrome c oxidase assembly protein COX19.
     
 0.665
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.