STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105936228RAP domain-containing protein. (641 aa)    
Predicted Functional Partners:
sardh
Sarcosine dehydrogenase.
  
 0.658
dmgdh
Dimethylglycine dehydrogenase, mitochondrial.
  
 0.658
amt
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.658
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.658
LOC105932395
D-aspartate oxidase.
  
 
 0.593
pipox
Pipecolic acid oxidase.
  
 
 0.593
ENSFHEP00000008694
Immunoresponsive gene 1, like.
  
 
 0.593
LOC105930097
Immunoresponsive gene 1, like.
  
 
 0.593
acod1
Aconitate decarboxylase 1.
  
 
 0.593
dao
D-amino-acid oxidase, tandem duplicate 2.
  
 
 0.593
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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