STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105937264Uncharacterized protein. (724 aa)    
Predicted Functional Partners:
LOC105932433
Uncharacterized protein.
  
     0.507
LOC105915576
Uncharacterized protein.
  
     0.456
LOC105916773
Zinc finger protein 518B.
  
     0.455
LOC105936121
Uncharacterized protein.
  
     0.452
LOC105923343
Uncharacterized protein.
  
     0.440
LOC105933229
Uncharacterized protein.
  
     0.423
ccdc15
Coiled-coil domain containing 15.
      
 0.422
ENSFHEP00000008200
PH domain-containing protein.
  
     0.418
LOC105928473
Interleukin 6 receptor.
  
     0.413
LOC105929737
Serine-rich adhesin for platelets.
  
     0.405
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.