STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000006235C-type lectin domain-containing protein. (147 aa)    
Predicted Functional Partners:
LOC105932311
Proline-serine-threonine phosphatase interacting protein 1a.
    
  0.423
LOC105930461
Proline-serine-threonine phosphatase interacting protein 1b.
    
  0.423
LOC105937561
Tenascin N.
   
  0.405
ENSFHEP00000014477
Uncharacterized protein.
    
  0.401
LOC105915855
Uncharacterized protein.
    
  0.401
tnr
Tenascin R (restrictin, janusin).
    
  0.401
LOC105915626
Tenascin C.
    
  0.401
LOC105915566
Zmp:0000000846.
    
  0.401
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.