STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000006795Uncharacterized protein. (966 aa)    
Predicted Functional Partners:
ENSFHEP00000006756
Uncharacterized protein.
 
     0.936
ENSFHEP00000025597
Uncharacterized protein.
 
     0.926
ENSFHEP00000025613
Uncharacterized protein.
 
      0.899
LOC105917287
Junction plakoglobin a.
   
 0.720
itgb4
Integrin beta.
   
 0.708
DSC1
Desmocollin 3; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.670
LOC105920702
Intersectin 2b.
    
 0.594
ENSFHEP00000007368
Uncharacterized protein.
    
 0.594
ENSFHEP00000025972
Uncharacterized protein.
    
 0.594
LOC105937542
Uncharacterized protein.
    
 0.551
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.