STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nt5dc35'-nucleotidase domain containing 3. (578 aa)    
Predicted Functional Partners:
samm50
SAMM50 sorting and assembly machinery component.
      
 0.618
pik3c2a
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha; Belongs to the PI3/PI4-kinase family.
      
 0.618
api5
Apoptosis inhibitor 5.
      
 0.611
nfyb
Nuclear transcription factor Y, beta a.
      
 0.515
nuak1
NUAK family, SNF1-like kinase, 1b.
      
 0.515
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
      
 0.513
LOC105920752
Ubiquitin-conjugating enzyme E2T (putative).
      
 0.416
LOC105922559
Pseudouridine 5'-phosphatase.
      
 0.416
LOC105928045
Nuclear receptor coactivator 5.
      
 0.414
LOC105935890
Si:ch211-117c9.1.
      
 0.412
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.