STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh20orf194Si:ch211-194c3.5. (1140 aa)    
Predicted Functional Partners:
dynlt1
Dynein, light chain, Tctex-type 1.
    
 
 0.581
LOC105916435
Dynein light chain Tctex-type 3.
    
 
 0.581
DYNLT3
Dynein light chain Tctex-type 3.
    
 
 0.581
dnal4
Dynein light chain.
    
 
 0.549
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 
 0.517
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
    
 
 0.506
WDR63
WD repeat domain 63.
    
 
 0.498
LOC105934537
Dynein light chain.
    
 
 0.486
DYNLL1
Dynein light chain.
    
 
 0.486
LOC105922707
Dynein light chain.
    
 
 0.486
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.