STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105935564Aryl hydrocarbon receptor nuclear translocator-like 2. (521 aa)    
Predicted Functional Partners:
LOC105938447
Cryptochrome DASH.
   
 0.892
LOC105927788
Neuronal PAS domain protein 2.
   
0.869
LOC105916744
Uncharacterized protein.
   
0.869
CLOCK
Clock circadian regulator a.
   
0.869
LOC105929650
Cryptochrome circadian regulator 2.
   
 0.860
LOC105934007
Cryptochrome circadian regulator 1a.
   
 0.857
LOC105930503
Cryptochrome circadian regulator 5.
   
 0.849
LOC105916018
Neuronal PAS domain protein 4 like.
    
 0.828
npas4
Neuronal PAS domain protein 4a.
    
 0.828
LOC105938336
Cryptochrome circadian regulator 3a.
   
 0.826
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.