STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pds5aPDS5 cohesin associated factor A. (1287 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes 3.
   
 0.991
smc1a
Structural maintenance of chromosomes protein.
   
 0.973
RBM20
RNA binding motif protein 20.
   
 0.973
LOC105920348
WAPL cohesin release factor b.
   
 0.973
LOC105928480
Structural maintenance of chromosomes protein.
   
 0.973
rad21
RAD21 cohesin complex component a.
   
 0.965
wapl
WAPL cohesin release factor a.
   
 0.958
LOC105931684
RAD21 cohesin complex component b.
   
 0.952
LOC105935255
RAD21 cohesin complex component like 1.
   
 0.952
ESCO2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
    
 0.922
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.