STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efhbUncharacterized protein. (580 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.996
LOC110368474
Enkurin domain-containing protein.
   
 
 0.943
efhc1
EF-hand domain (C-terminal) containing 1.
   
   0.940
ENSFHEP00000013903
PARK2 co-regulated.
   
   0.905
PACRG
Parkin coregulated.
   
   0.905
mns1
Meiosis-specific nuclear structural 1.
    
 
 0.877
tekt3
Tektin 3.
   
   0.876
cfap52
Cilia and flagella associated protein 52.
   
   0.872
ENSFHEP00000027982
Uncharacterized protein.
   
   0.869
LOC105915890
Cilia and flagella associated protein 45.
   
   0.867
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.