STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000008109Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.897
cunh9orf116
Uncharacterized protein.
    
 
 0.751
efcab1
EF-hand calcium binding domain 1.
    
 
 0.697
ttc25
Tetratricopeptide repeat domain 25.
    
 
 0.686
efhc1
EF-hand domain (C-terminal) containing 1.
    
 
 0.686
tekt3
Tektin 3.
    
 
 0.679
ccdc151
Uncharacterized protein.
    
 
 0.679
ENSFHEP00000027982
Uncharacterized protein.
   
   0.669
LOC105915890
Cilia and flagella associated protein 45.
   
   0.668
ccdc173
Coiled-coil domain-containing protein 173.
    
   0.660
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.