STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpn1Carboxypeptidase N, polypeptide 1. (448 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
  0.980
LOC110369482
LRRCT domain-containing protein.
    
 0.696
ENSFHEP00000015518
LRRCT domain-containing protein.
    
 0.696
LOC105933075
Insulin growth factor-binding complex acid labile subunit-like protein.
    
 0.696
ENSFHEP00000025197
Si:ch211-117l17.7.
    
 0.696
LOC105936779
Leucine-rich repeat-containing protein.
    
 0.696
ENSFHEP00000006626
Uncharacterized protein.
   
 
 0.590
cpo
Carboxypeptidase O.
  
 
 0.577
cpb2
Carboxypeptidase B2 (plasma).
  
 
 0.574
cpa6
Carboxypeptidase A6.
  
 
 0.573
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.