STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc1a2Solute carrier family 1 member 2b. (585 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.684
LOC105935975
Vesicular inhibitory amino acid transporter.
   
 
 0.662
gng3
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.643
ENSFHEP00000006217
Stathmin; Belongs to the stathmin family.
     
 0.638
LOC105919409
Stathmin-like 4, like.
     
 0.638
LOC105929361
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
      
 0.631
LOC105934542
Solute carrier family 13 member 5b.
    
 0.523
slc13a4
Solute carrier family 13 member 4.
    
 0.523
slc13a3
Solute carrier family 13 member 3.
    
 0.523
LOC105920619
Solute carrier family 13 member 5a.
    
 0.523
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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