STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsc2TSC complex subunit 2. (1700 aa)    
Predicted Functional Partners:
LOC105932864
TBC1 domain family, member 7.
    
 0.999
LOC105927446
TSC complex subunit 1b.
   
 0.997
LOC105919467
TSC complex subunit 1.
   
 0.996
LOC105927128
Ras homolog, mTORC1 binding like 1.
    
 0.994
rheb
Ras homolog, mTORC1 binding.
    
 0.992
ddit4
DNA-damage-inducible transcript 4.
     
 0.970
prkaa1
Non-specific serine/threonine protein kinase.
    
 0.968
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.968
LOC105927955
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.966
LOC105940337
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.966
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.