STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr92WD repeat domain 92. (358 aa)    
Predicted Functional Partners:
ppp3r1
Uncharacterized protein.
 
  
 0.981
LOC105919313
Uncharacterized protein.
 
  
 0.980
rpap3
RNA polymerase II associated protein 3.
   
 0.957
pih1d1
PIH1 domain containing 1.
    
 
 0.945
uxt
Ubiquitously-expressed, prefoldin-like chaperone.
   
 
 0.923
ENSFHEP00000014387
Serine/threonine-protein phosphatase.
    
 0.837
LOC105929196
Serine/threonine-protein phosphatase.
    
 0.837
LOC105931113
Serine/threonine-protein phosphatase.
    
 0.837
PPP3CA
Serine/threonine-protein phosphatase.
    
 0.837
ENSFHEP00000026946
Uncharacterized protein.
    
 0.837
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.