STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IKZF5IKAROS family zinc finger 5. (480 aa)    
Predicted Functional Partners:
PRTG
Protogenin.
      
 0.619
abl2
Tyrosine-protein kinase.
    
 0.572
dnpep
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
      
 0.529
ythdc1
YTH domain containing 1.
      
 0.512
ENSFHEP00000000334
Uncharacterized protein.
    
  0.511
YTHDC2
YTH domain containing 2.
   
 0.500
LOC105922837
BRCT domain-containing protein.
    
  0.479
yeats2
YEATS domain containing 2.
    
 
 0.478
ipo11
Importin 11.
    
 
 0.440
LOC105936042
PHD finger protein 1.
     
 0.433
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.