STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nipa2NIPA magnesium transporter 2. (426 aa)    
Predicted Functional Partners:
tubgcp5
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
  
 0.748
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
  
 0.742
uxs1
UDP-glucuronate decarboxylase 1.
   
 
 0.662
LOC105939149
LIM domain kinase 1b.
    
 
 0.645
robo1
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
      
 0.637
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
      
 0.637
ENSFHEP00000022754
Uncharacterized protein.
      
 0.637
LOC105922745
Glutamate receptor, ionotropic, kainate 1a.
      
 0.637
unc50
Unc-50 homolog (C. elegans).
 
    
 0.577
alg5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
   
 
  0.475
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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