STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105918108Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.821
pot1
Protection of telomeres 1 homolog.
    
 
 0.810
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.792
cinp
Cyclin-dependent kinase 2-interacting protein.
    
 0.784
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.784
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 
 0.759
c6
Complement component 6.
   
 0.735
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.644
birc6
Baculoviral IAP repeat containing 6.
    
 0.594
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 
 0.572
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.