STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105926883Uncharacterized protein. (529 aa)    
Predicted Functional Partners:
nkx2-5
NK2 homeobox 5.
   
 
 0.876
yap1
Yes-associated protein 1.
    
 0.750
gata4
GATA binding protein 4.
    
 0.633
mef2c
Myocyte enhancer factor 2cb.
      
 0.515
ENSFHEP00000003392
Heart and neural crest derivatives expressed 2.
   
 0.505
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.481
zfpm2
Zinc finger protein, FOG family member 2a.
    
 
 0.439
LOC105931910
Fibroblast growth factor binding protein 1b.
      
 0.426
LOC105935359
Polypyrimidine tract binding protein 1a.
      
 0.412
ENSFHEP00000031037
Membrane frizzled-related protein.
    
 0.400
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.