STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000010577Protein kinase domain-containing protein. (121 aa)    
Predicted Functional Partners:
ENSFHEP00000028059
C2 domain-containing protein.
 
      0.886
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.806
ENSFHEP00000010588
Protein kinase domain-containing protein.
 
      0.792
card11
Caspase recruitment domain-containing protein 11.
   
 0.742
mras
Muscle RAS oncogene homolog.
   
 0.717
vdac1
Voltage-dependent anion channel 1.
    
 0.693
LOC105917085
Mitogen-activated protein kinase.
    
  0.686
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
 0.671
trpa1
Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.668
marcks
Myristoylated alanine-rich protein kinase C substrate a.
    
 0.667
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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