STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfgef3ARFGEF family member 3. (1790 aa)    
Predicted Functional Partners:
ENSFHEP00000011286
Prohibitin.
    
 
 0.736
ENSFHEP00000016371
Prohibitin.
    
 
 0.736
ccdc167
Uncharacterized protein.
      
 0.601
chmp7
Charged multivesicular body protein 7.
      
 0.567
LOC105933536
Developmentally regulated GTP binding protein 2.
      
 0.551
orc5
Origin recognition complex, subunit 5.
      
 0.537
ENSFHEP00000005594
PWWP domain-containing protein.
      
 0.509
eapp
E2f-associated phosphoprotein.
      
 0.491
ENSFHEP00000003250
Uncharacterized protein.
      
 0.480
phb
Prohibitin.
    
 
 0.460
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.