STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105918651START domain-containing protein. (277 aa)    
Predicted Functional Partners:
stard3
StAR-related lipid transfer (START) domain containing 3.
     
0.797
stard3nl
STARD3 N-terminal like.
     
 0.768
VAPB
VAMP associated protein B and C.
    
 0.717
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.717
LOC105918737
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.717
mospd1
Motile sperm domain containing 1.
    
 0.717
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
   
 
 0.678
fdx2
Ferredoxin 2.
   
 
 0.678
fdxr
NADPH:adrenodoxin oxidoreductase, mitochondrial.
     
 0.638
FADS6
Fatty acid desaturase 6.
     
 0.638
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.