STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105925482Uncharacterized protein. (394 aa)    
Predicted Functional Partners:
LOC105928568
Cell division control protein 42.
    
 0.619
CDC42
Cell division control protein 42.
    
 0.619
rnd3
Rho family GTPase 3a.
    
 0.468
RND1
Rho family GTPase 1.
   
 0.463
LOC105928994
Rho-related GTP-binding protein Rho6.
   
 0.463
LOC110368099
Uncharacterized protein.
    
 0.457
LOC105927124
Uncharacterized protein.
    
 0.457
LOC105920975
Uncharacterized protein.
    
 0.457
LOC105928052
Ras homolog family member Ca.
    
 0.457
LOC105929125
Transforming protein RhoA.
    
 0.457
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.