STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105917005Calcium/calmodulin-dependent protein kinase kinase 1, alpha b; Belongs to the protein kinase superfamily. (480 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
0.810
calml4
Calmodulin-like 4a.
    
 0.794
camk4
Si:ch73-60h1.1.
  
 
0.786
prkaa1
Non-specific serine/threonine protein kinase.
  
 
0.784
prkaa2
Non-specific serine/threonine protein kinase.
    
0.770
LOC105929309
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
    
 0.733
LOC105917325
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
    
 0.733
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.733
LOC105930621
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.731
calm2
Calmodulin 2.
    
 0.731
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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