STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105934945Serine/threonine/tyrosine kinase 1b. (447 aa)    
Predicted Functional Partners:
LOC105916231
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.761
LOC105926065
Colony stimulating factor 1b (macrophage).
    
 0.640
ENSFHEP00000006741
Uncharacterized protein.
      
 0.637
LOC105932783
Polymerase I and transcript release factor.
      
 0.637
il34
Interleukin 34.
    
 0.616
kitlg
Kit ligand a.
    
 0.615
pgf
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
    
 0.579
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
    
 0.548
mst1r
Macrophage-stimulating protein receptor.
    
 
0.540
LOC105933677
Macrophage stimulating 1 receptor a.
    
 
0.540
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.