STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM67Tripartite motif containing 67. (680 aa)    
Predicted Functional Partners:
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.580
dcc
DCC netrin 1 receptor.
   
 
 0.533
LOC105916396
Immunoglobulin superfamily, DCC subclass, member 4.
   
 
 0.533
LOC105921778
Uncharacterized protein.
   
 
 0.533
neo1
Neogenin 1b.
   
 
 0.533
ENSFHEP00000032726
Immunoglobulin superfamily, DCC subclass, member 3.
   
 
 0.533
fndc1
Fibronectin type III domain containing 1.
    
 
 0.523
ENSFHEP00000006667
RBR-type E3 ubiquitin transferase.
      
 0.516
ubr7
Ubiquitin protein ligase E3 component n-recognin 7.
      
 0.516
ttc13
Tetratricopeptide repeat domain 13.
      
 0.516
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.