STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000013749Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
LOC105920223
Malate synthase-like.
  
 
 0.978
hmgcll1
3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1.
  
 
 0.944
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
  
 
 0.944
LOC105917111
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.937
mccc2
Methylcrotonoyl-CoA carboxylase 2 (beta).
  
 
 0.935
mccc1
Methylcrotonoyl-CoA carboxylase 1 (alpha).
  
 0.934
LOC105916545
Si:ch211-198n5.11.
  
 
 0.933
LOC105925265
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.924
LOC105915952
Sterol carrier protein 2b.
  
 0.924
hsdl2
Hydroxysteroid dehydrogenase 2-like protein.
  
 0.915
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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