STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105915879Peptidoglycan-recognition protein; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Involved in innate immunity. (204 aa)    
Predicted Functional Partners:
pglyrp2
Uncharacterized protein.
  
 
0.845
pigu
Phosphatidylinositol glycan anchor biosynthesis, class U.
     
 0.709
LOC105936311
Si:ch73-263o4.3.
   
 0.535
SDS
Serine dehydratase.
   
 0.535
LOC105926159
PALP domain-containing protein.
   
 0.535
LOC105917346
PALP domain-containing protein.
   
 0.535
esd
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 0.521
ATP6
ATP synthase subunit a.
      
 0.517
nlrc3
NLR family, CARD domain containing 3.
      
 0.513
ugcg
UDP-glucose ceramide glucosyltransferase.
   
 0.512
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.