STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105938319Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
   0.802
mrpl47
39S ribosomal protein L47, mitochondrial.
   
 
 0.610
mrpl22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.610
mrpl33
Mitochondrial ribosomal protein L33.
   
 
 0.605
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.605
LOC105918212
Mitochondrial ribosomal protein L23.
   
 
 0.604
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.603
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.602
mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.601
mrpl19
Mitochondrial ribosomal protein L19.
   
   0.588
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.