STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35e1Solute carrier family 35 member E1. (378 aa)    
Predicted Functional Partners:
slc35g1
Solute carrier family 35 member G1.
      
 0.607
slc35c2
Solute carrier family 35 member C2.
      
0.602
slc35c1
Solute carrier family 35 member C1.
      
 0.590
nr2c2ap
Nuclear receptor 2C2-associated protein.
      
 0.549
cherp
Calcium homeostasis endoplasmic reticulum protein.
      
 0.538
SUGP1
SURP and G-patch domain containing 1.
      
 0.527
slc35b2
Solute carrier family 35 member B2.
    
 
 0.521
slc35b4
Solute carrier family 35 member B4.
      
 0.511
spryd7
SPRY domain-containing protein 7.
      
 0.511
fbxw11
F-box and WD repeat domain containing 11b.
   
 
  0.486
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.