STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105931984AB hydrolase-1 domain-containing protein. (377 aa)    
Predicted Functional Partners:
LOC105920223
Malate synthase-like.
    
 0.874
LOC105920610
PNPLA domain-containing protein.
    
 0.852
LOC105936118
Patatin-like phospholipase domain containing 3.
    
 0.793
LOC105917254
Patatin-like phospholipase domain containing 2.
    
 0.793
CRLS1
Cardiolipin synthase 1.
    
 0.787
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.782
palb2
PALB2_WD40 domain-containing protein.
   
 0.782
pnpla4
Patatin phospholipase domain-containing 4-like protein.
    
 0.724
LOC105926204
PNPLA domain-containing protein.
    
 0.701
ENSFHEP00000019443
Uncharacterized protein.
   
 0.684
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.