STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000015755LITAF domain-containing protein. (143 aa)    
Predicted Functional Partners:
ENSFHEP00000005309
Uncharacterized protein.
    
 0.876
ENSFHEP00000005371
Uncharacterized protein.
    
 0.876
ENSFHEP00000012478
LITAF domain-containing protein.
    
0.739
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.681
ENSFHEP00000031973
Lin-52 DREAM MuvB core complex component.
    
 0.550
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.545
LOC105917477
Retinoblastoma binding protein 4.
    
 0.543
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.541
LOC105920057
LITAF domain-containing protein.
    
 0.530
LOC105917092
Si:ch211-202h22.8.
    
 0.530
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.