STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000017141Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
LOC105936151
RAN binding protein 2.
   
 0.988
kpnb1
Karyopherin (importin) beta 1.
   
 0.901
ENSFHEP00000028496
Adhesion G protein-coupled receptor B1b.
 
      0.899
LOC105935336
Adhesion G protein-coupled receptor B1a; Belongs to the G-protein coupled receptor 2 family.
 
      0.891
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
    
 0.871
RANGAP1
Ran GTPase activating protein 1.
   
 0.863
rangap1
RAN GTPase activating protein 1a.
   
 0.863
nup153
Nucleoporin 153.
    
 0.845
nup50
Nucleoporin 50.
   
  0.807
NUP214
Nucleoporin 214.
    
 0.783
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.