STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000017184Zgc:55781. (412 aa)    
Predicted Functional Partners:
psma2
Proteasome subunit alpha type.
 
    
 0.783
wdr83
WD repeat domain-containing protein 83.
 
 
    0.688
sec61g
SEC61 translocon gamma subunit.
      
 0.606
dpcd
Deleted in primary ciliary dyskinesia homolog (mouse).
      
 0.582
nrbf2
Nuclear receptor binding factor 2b.
      
 0.582
LOC105924874
VOPP1 WW domain binding protein.
      
 0.574
LOC105923061
Biliverdin reductase A.
      
 0.538
mrps24
Mitochondrial ribosomal protein S24.
      
 0.418
tmem165
GDT1 family protein.
      
 0.418
zfpm1
Zinc finger protein, FOG family member 1.
      
 0.412
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.