STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
casc4Cancer susceptibility candidate 4. (477 aa)    
Predicted Functional Partners:
casc3
Casc3 exon junction complex subunit.
      
 0.578
LOC105934068
Methyl-CpG binding domain protein 1b.
  
 
  0.552
LOC105917506
Uncharacterized protein.
  
 
  0.549
ENSFHEP00000020981
TROVE domain-containing protein.
    
  0.519
gtpbp10
GTP-binding protein 10 (putative).
      
 0.511
tbc1d25
TBC1 domain family, member 25.
      
 0.511
LOC105916938
Zinc finger protein 503.
      
 0.493
AR
Androgen receptor.
  
 
   0.491
supt3h
Uncharacterized protein.
    
 0.487
KIF18A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
 
   0.480
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.