STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105938796RAB11a, member RAS oncogene family. (215 aa)    
Predicted Functional Partners:
LOC105938192
Uncharacterized protein.
  
 0.980
LOC105932843
RAB11 family interacting protein 5a (class I).
    
 0.976
LOC105926795
Uncharacterized protein.
  
 0.971
rab11fip2
RAB11 family interacting protein 2 (class I).
  
 0.965
LOC105915323
Uncharacterized protein.
  
 0.962
LOC105917247
RAB3A interacting protein (rabin3)-like 1.
    
 0.863
rab3ip
RAB3A interacting protein (rabin3).
    
 0.863
LOC105920702
Intersectin 2b.
    
 0.858
ENSFHEP00000007368
Uncharacterized protein.
    
 0.858
ENSFHEP00000025972
Uncharacterized protein.
    
 0.858
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.