STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105935891CTTNBP2 N-terminal like b. (602 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.947
ENSFHEP00000008372
Cortactin binding protein 2.
    
  
0.930
LOC105923971-2
MOB family member 4, phocein.
    
 
 0.929
LOC105930061
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.846
strip1
Striatin interacting protein 1.
    
 
 0.814
LOC105933841
Striatin interacting protein 2.
    
 
 0.814
cct2
Chaperonin containing TCP1, subunit 2 (beta).
    
   0.794
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.794
tcp1
T-complex 1.
    
   0.794
ENSFHEP00000013516
WD_REPEATS_REGION domain-containing protein.
   
 
 0.713
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.