STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnlsRenalase, FAD-dependent amine oxidase. (347 aa)    
Predicted Functional Partners:
ENSFHEP00000014545
Uncharacterized protein.
    
  0.902
nadk
NAD kinase a.
    
  0.902
LOC105915220
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.897
ppox
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.783
ENSFHEP00000019469
Uncharacterized protein.
     
 0.783
ENDOV
Endonuclease V.
     
 0.730
urod
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
     
 0.730
LOC105921176
Cholinergic receptor, nicotinic, delta (muscle).
      
 0.633
ENSFHEP00000007674
ITI_HC_C domain-containing protein.
    
  0.608
itih5
Inter-alpha-trypsin inhibitor heavy chain 5.
    
  0.608
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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