STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105929593Sulfotransferase; Belongs to the sulfotransferase 1 family. (399 aa)    
Predicted Functional Partners:
LOC105929649
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
 
0.954
ENSFHEP00000018422
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
 
0.952
kera
Keratocan.
     
 0.741
chst2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
  
 
0.728
LOC105938628
Sulfotransferase; Belongs to the sulfotransferase 1 family.
    
 
0.724
lum
Lumican.
     
 0.670
ENSFHEP00000022764
Uncharacterized protein.
     
 0.526
ogn
Osteoglycin, paralog a.
     
 0.526
FAM210B
Family with sequence similarity 210 member B.
   
  
 0.414
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.