STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam185aFamily with sequence similarity 185 member A. (389 aa)    
Predicted Functional Partners:
pex13
Peroxisomal biogenesis factor 13.
   
 0.990
LOC105925265
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.986
LOC105915952
Sterol carrier protein 2b.
    
 0.986
LOC105920747
Enoyl-CoA delta isomerase 2.
    
 0.985
pex19
Peroxisomal biogenesis factor 19.
    
 0.985
hsdl2
Hydroxysteroid dehydrogenase 2-like protein.
    
 0.985
ephx2
AB hydrolase-1 domain-containing protein.
   
 
  0.981
zfand4
Zinc finger, AN1-type domain 4.
    
  0.981
pex7
Peroxisomal biogenesis factor 7.
    
 0.969
pex5l
Peroxisomal biogenesis factor 5-like a.
   
 0.937
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.