STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105939117Carbonic anhydrase IV c; Belongs to the alpha-carbonic anhydrase family. (289 aa)    
Predicted Functional Partners:
rpf2
Ribosome production factor 2 homolog.
   
 
 0.687
LOC105916756
Uncharacterized protein; Belongs to the GST superfamily.
      
 0.636
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.526
LOC105916754
Uncharacterized protein; Belongs to the GST superfamily.
      
 0.524
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.524
RPL5
Ribosomal protein L5b.
    
 
 0.513
RPL5-2
Ribosomal protein L5.
    
 
 0.513
ENSFHEP00000007713
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
  
   
 0.499
wdr43
WD repeat domain 43.
   
    0.474
tsr2
Uncharacterized protein.
   
  
 0.472
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.