STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105939271Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family. (196 aa)    
Predicted Functional Partners:
crybb2
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
   
  
0.558
BFSP1
Beaded filament structural protein 1; Belongs to the intermediate filament family.
   
  
 0.488
cryba2
Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.
  
  
0.487
LOC105917536
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.478
ENSFHEP00000003992
TAFA chemokine like family member 4b.
  
     0.475
TAFA3
TAFA chemokine like family member 3.
  
     0.473
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.466
ENSFHEP00000014595
Uncharacterized protein.
  
     0.462
ENSFHEP00000009962
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.448
ENSFHEP00000016157
Si:dkey-238f9.1.
  
     0.442
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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