STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105925504SCY domain-containing protein. (93 aa)    
Predicted Functional Partners:
LOC105927746
Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.
    
 0.856
LOC105927705
Chemokine (C-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
 0.786
LOC105927745
Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.
    
 0.777
ccl22
SCY domain-containing protein.
  
 
 
0.742
ENSFHEP00000007720
C-C motif chemokine.
  
  
 
0.733
LOC105925525
SCY domain-containing protein.
  
  
 
0.729
ENSFHEP00000009250
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
    
 0.715
LOC105920584
Chemokine (C motif) receptor 1b, duplicate 1; Belongs to the G-protein coupled receptor 1 family.
    
  0.700
LOC105928264
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.617
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
    
  0.597
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.